J056_002812 protein (Wallemia ichthyophaga) - STRING interaction network

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Score

J056_002812

Protein gar2. (484 aa)

Predicted Functional Partners:

J056_001673

0.989

J056_000564

0.989

J056_003701

0.957

J056_003454

0.952

J056_003679

0.893

J056_001398

0.831

J056_002335

0.828

J056_003612

0.809

J056_003744

0.804

J056_002097

0.804

Your Current Organism:

Wallemia ichthyophaga

NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
J056_000564	J056_001398	R9AEW9	R9ACG1	Nucleolar protein 56.	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	0.903
J056_000564	J056_001673	R9AEW9	R9ABJ5	Nucleolar protein 56.	rRNA 2'-O-methyltransferase fibrillarin 2.	0.999
J056_000564	J056_002097	R9AEW9	R9AP61	Nucleolar protein 56.	Putative ribosomal RNA methyltransferase nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.933
J056_000564	J056_002335	R9AEW9	R9AGM2	Nucleolar protein 56.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.835
J056_000564	J056_002812	R9AEW9	R9AFG9	Nucleolar protein 56.	Protein gar2.	0.989
J056_000564	J056_003612	R9AEW9	R9APB2	Nucleolar protein 56.	Nucleolar protein 58.	0.999
J056_000564	J056_003679	R9AEW9	R9AIH6	Nucleolar protein 56.	ATP-dependent RNA helicase DBP2-A.	0.613
J056_000564	J056_003744	R9AEW9	R9AIP0	Nucleolar protein 56.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.841
J056_001398	J056_000564	R9ACG1	R9AEW9	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Nucleolar protein 56.	0.903
J056_001398	J056_001673	R9ACG1	R9ABJ5	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	rRNA 2'-O-methyltransferase fibrillarin 2.	0.976
J056_001398	J056_002097	R9ACG1	R9AP61	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Putative ribosomal RNA methyltransferase nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.557
J056_001398	J056_002335	R9ACG1	R9AGM2	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.525
J056_001398	J056_002812	R9ACG1	R9AFG9	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Protein gar2.	0.831
J056_001398	J056_003612	R9ACG1	R9APB2	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Nucleolar protein 58.	0.923
J056_001398	J056_003679	R9ACG1	R9AIH6	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	ATP-dependent RNA helicase DBP2-A.	0.529
J056_001398	J056_003701	R9ACG1	R9AIT6	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	Protein pxr1.	0.477
J056_001398	J056_003744	R9ACG1	R9AIP0	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.710
J056_001673	J056_000564	R9ABJ5	R9AEW9	rRNA 2'-O-methyltransferase fibrillarin 2.	Nucleolar protein 56.	0.999
J056_001673	J056_001398	R9ABJ5	R9ACG1	rRNA 2'-O-methyltransferase fibrillarin 2.	H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs.	0.976
J056_001673	J056_002097	R9ABJ5	R9AP61	rRNA 2'-O-methyltransferase fibrillarin 2.	Putative ribosomal RNA methyltransferase nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.	0.941