STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_004757Putative asparagine synthetase. (589 aa)    
Predicted Functional Partners:
J056_001412
Aspartate aminotransferase, cytoplasmic.
   
 
 0.970
J056_004534
Argininosuccinate synthase.
   
 0.953
J056_002670
L-asparaginase 2-4.
     
 0.947
J056_000572
Adenylosuccinate synthetase; Plays an important role in the de novo pathway and in the salvage pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP.
  
 
 0.934
J056_002512
Protein pyrABCN.
    
 0.914
J056_003849
Putative aspartokinase.
  
 
 0.912
J056_000614
Glutamate decarboxylase.
     
 0.861
J056_002114
Glutamine synthetase.
  
 
 0.846
J056_000843
Uncharacterized protein.
 
    
 0.778
J056_004389
Tryptophan synthase.
  
  
 0.774
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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