STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_002706Diphosphomevalonate decarboxylase. (319 aa)    
Predicted Functional Partners:
J056_000726
Isopentenyl-diphosphate Delta-isomerase.
  
 
 0.992
J056_001329
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.991
J056_001784
Phosphomevalonate kinase; Belongs to the GHMP kinase family. Mevalonate kinase subfamily.
  
 
 0.986
J056_004047
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
  
 0.890
J056_002898
Uncharacterized protein.
  
 
 0.887
J056_001318
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
 
 
 0.860
J056_002076
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
 
 0.828
J056_000234
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
  
 0.774
J056_000439
Squalene monooxygenase.
   
  
 0.772
J056_002055
FMN hydroxy acid dehydrogenase domain-containing protein.
    
 0.751
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.