STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_002545Serine/threonine-protein kinase ppk16. (1308 aa)    
Predicted Functional Partners:
J056_004837
Nuclear protein SNF4.
   
 0.816
J056_002409
SNF1 protein kinase subunit beta-2.
    
 0.809
J056_004550
Serine/threonine-protein kinase ATG1.
  
 
0.645
J056_000882
Meiotically up-regulated 70 protein.
   
 0.560
J056_004577
WD repeat-containing protein mip1.
    
 0.523
J056_000835
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.520
J056_002664
Serine/threonine-protein kinase ssp1.
  
 
0.513
J056_001133
Vacuolar protein sorting-associated protein atg6.
    
 0.510
J056_000199
Serine/threonine-protein kinase ppk19.
    
 0.488
J056_002145
Phosphatidylinositol 3-kinase vps34; Belongs to the PI3/PI4-kinase family.
    
 0.483
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.