STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_004491Peroxisomal membrane protein PEX30. (328 aa)    
Predicted Functional Partners:
J056_001429
Vacuolar protein sorting-associated protein 37A.
    
 0.631
J056_000493
PH domain-containing protein.
    
 
 0.542
J056_001246
Dynactin subunit 4.
    
   0.537
J056_000298
Dynactin subunit 5.
    
   0.537
J056_002624
Peroxisomal membrane protein PEX29.
    
 
 0.515
J056_004036
Uncharacterized membrane protein.
    
 0.514
J056_002681
Heat shock 70 kDa protein; Belongs to the heat shock protein 70 family.
    
 0.465
J056_002806
Chitin deacetylase.
    
 0.463
J056_001736
Chitin deacetylase 1.
    
 0.463
J056_001730
Uncharacterized protein.
    
 0.463
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.