STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_004615Phagocyte signaling-impaired protein. (816 aa)    
Predicted Functional Partners:
J056_003280
N-alpha-acetyltransferase 20.
    
 
 0.994
J056_001636
N-alpha-acetyltransferase 15, NatA auxiliary subunit.
   
  
 0.696
J056_004035
N-alpha-acetyltransferase 50.
   
  
 0.631
J056_001662
Uncharacterized protein.
   
  
 0.621
J056_004460
N-alpha-acetyltransferase 30.
      
 0.616
J056_004796
Acetyltransferase A complex catalytic subunit ard1.
      
 0.615
J056_004418
Tropomyosin-2.
   
 
 0.608
J056_002958
N-alpha-acetyltransferase 40.
      
 0.530
J056_003407
Uncharacterized protein.
   
    0.436
J056_000735
E3 ubiquitin-protein ligase listerin.
   
    0.432
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.