STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_004619Ubiquitin-like protein 1. (76 aa)    
Predicted Functional Partners:
J056_002858
NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.997
J056_001458
NEDD8-activating enzyme E1 catalytic subunit.
   
 0.997
J056_004694
Elongation factor 3; Belongs to the universal ribosomal protein uL22 family.
    
 
 0.989
J056_002027
mRNA export factor elf1.
    
 
 0.989
J056_004250
RING-box protein 1.
   
 0.986
J056_004430
NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-ULA1 E1 enzyme.
   
 0.985
J056_003820
COP9 signalosome complex subunit 5.
   
 0.983
J056_001275
COP9 signalosome complex subunit 6.
   
 0.981
J056_003374
ATP-dependent DNA helicase MPH1.
   
 0.965
J056_003583
Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase.
   
 0.957
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.