STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_004611Purine-cytosine permease fcyB; Belongs to the purine-cytosine permease (2.A.39) family. (513 aa)    
Predicted Functional Partners:
J056_001066
Histone acetyltransferase type B subunit 2.
   
 0.593
J056_002245
Metal homeostasis factor atx1.
   
   0.541
J056_003592
Uncharacterized protein.
    
   0.538
J056_003523
50S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
 
 0.457
J056_001357
Ribosomal_L18e/L15P domain-containing protein.
    
 
 0.454
J056_000339
Transcription factor prr1.
   
 
 0.444
J056_000267
Uncharacterized protein.
    
 
 0.443
J056_000480
rRNA biosis protein rrp5.
   
   0.436
J056_004215
Putative ubiquitin carboxyl-terminal hydrolase 12; Belongs to the peptidase C19 family.
   
 
 0.410
J056_004513
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.401
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.