Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
J056_000179 | J056_000211 | R9ARI7 | R9AXP1 | DNA helicase; Belongs to the MCM family. | Cell division control protein 6-like protein. | 0.999 |
J056_000179 | J056_000563 | R9ARI7 | R9AEZ8 | DNA helicase; Belongs to the MCM family. | DNA helicase; Belongs to the MCM family. | 0.999 |
J056_000179 | J056_001860 | R9ARI7 | R9AB80 | DNA helicase; Belongs to the MCM family. | Origin recognition complex subunit 2. | 0.998 |
J056_000179 | J056_001930 | R9ARI7 | R9ABE1 | DNA helicase; Belongs to the MCM family. | DNA helicase; Belongs to the MCM family. | 0.999 |
J056_000179 | J056_001998 | R9ARI7 | R9APF7 | DNA helicase; Belongs to the MCM family. | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | 0.997 |
J056_000179 | J056_002336 | R9ARI7 | R9AAK2 | DNA helicase; Belongs to the MCM family. | Cell cycle serine/threonine-protein kinase hsk1. | 0.998 |
J056_000179 | J056_002424 | R9ARI7 | R9AA54 | DNA helicase; Belongs to the MCM family. | Cell division control protein 45-like protein. | 0.999 |
J056_000179 | J056_002937 | R9ARI7 | R9ANN9 | DNA helicase; Belongs to the MCM family. | DNA helicase; Belongs to the MCM family. | 0.999 |
J056_000179 | J056_003224 | R9ARI7 | R9A9F1 | DNA helicase; Belongs to the MCM family. | DNA helicase. | 0.999 |
J056_000179 | MCM7 | R9ARI7 | R9AGS8 | DNA helicase; Belongs to the MCM family. | DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] | 0.999 |
J056_000211 | J056_000179 | R9AXP1 | R9ARI7 | Cell division control protein 6-like protein. | DNA helicase; Belongs to the MCM family. | 0.999 |
J056_000211 | J056_000563 | R9AXP1 | R9AEZ8 | Cell division control protein 6-like protein. | DNA helicase; Belongs to the MCM family. | 0.999 |
J056_000211 | J056_001860 | R9AXP1 | R9AB80 | Cell division control protein 6-like protein. | Origin recognition complex subunit 2. | 0.999 |
J056_000211 | J056_001930 | R9AXP1 | R9ABE1 | Cell division control protein 6-like protein. | DNA helicase; Belongs to the MCM family. | 0.999 |
J056_000211 | J056_001998 | R9AXP1 | R9APF7 | Cell division control protein 6-like protein. | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | 0.999 |
J056_000211 | J056_002336 | R9AXP1 | R9AAK2 | Cell division control protein 6-like protein. | Cell cycle serine/threonine-protein kinase hsk1. | 0.874 |
J056_000211 | J056_002424 | R9AXP1 | R9AA54 | Cell division control protein 6-like protein. | Cell division control protein 45-like protein. | 0.934 |
J056_000211 | J056_002937 | R9AXP1 | R9ANN9 | Cell division control protein 6-like protein. | DNA helicase; Belongs to the MCM family. | 0.998 |
J056_000211 | J056_003224 | R9AXP1 | R9A9F1 | Cell division control protein 6-like protein. | DNA helicase. | 0.999 |
J056_000211 | MCM7 | R9AXP1 | R9AGS8 | Cell division control protein 6-like protein. | DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] | 0.999 |
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