STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_003583Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase. (155 aa)    
Predicted Functional Partners:
J056_001131
UV excision repair protein rhp23.
   
 0.998
J056_000694
Cell division control protein 48; Belongs to the AAA ATPase family.
   
 0.986
J056_000699
ATPase family 2 protein.
   
 0.986
J056_000834
Peroxiredoxin.
  
 0.981
J056_003660
E3 ubiquitin-protein ligase synoviolin.
   
 0.979
J056_004429
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.967
J056_002240
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
   
 0.967
J056_003189
26S protease regulatory subunit 4; Belongs to the AAA ATPase family.
   
 0.962
J056_003420
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.962
J056_000414
Ubiquitin-40S ribosomal protein S27a.
   
 0.960
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.