STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_003644Separin. (2037 aa)    
Predicted Functional Partners:
J056_004171
Serine/threonine-protein kinase.
   
 0.993
J056_002161
Double-strand-break repair protein rad21-like protein.
   
 0.990
J056_004649
Structural maintenance of chromosomes protein.
   
 0.986
J056_003136
Cohesin subunit psc3.
    
 0.983
J056_004684
Structural maintenance of chromosomes protein.
   
 0.982
J056_000556
Protein phosphatase PP2A regulatory subunit B; Belongs to the phosphatase 2A regulatory subunit B family.
    
 
 0.969
J056_003466
Tyrosine-protein phosphatase CDC14-like protein.
   
 0.967
J056_000416
Checkpoint serine/threonine-protein kinase BUB1.
   
 
 0.925
J056_004624
Kinesin-like protein KIF11-B; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.891
J056_002929
Putative kinetochore protein NDC80.
   
 
 0.887
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.