STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_003571Protein FAM40A. (1012 aa)    
Predicted Functional Partners:
J056_000549
Striatin-3.
    
 
 0.952
J056_004044
MOB kinase activator-like 4.
    
 
 0.922
J056_004409
Protein phosphatase PP2A regulatory subunit A.
    
 
 0.914
J056_003347
Serine/threonine-protein phosphatase.
    
 
 0.850
J056_003564
FHA domain-containing protein.
    
 
 0.700
J056_001058
Serine/threonine-protein phosphatase.
    
 
 0.621
J056_004694
Elongation factor 3; Belongs to the universal ribosomal protein uL22 family.
   
  
 0.558
J056_002027
mRNA export factor elf1.
   
  
 0.558
J056_004051
Serine/threonine-protein kinase svkA.
    
 
 0.538
J056_004828
Serine/threonine-protein kinase KIC1.
    
 
 0.538
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.