STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_001382Palmitoyl-protein thioesterase 1. (323 aa)    
Predicted Functional Partners:
J056_001464
Long-chain-fatty-acid--CoA ligase 1.
     
 0.928
J056_001020
PKS_ER domain-containing protein.
     
 0.901
J056_001442
Protein PNS1; Belongs to the CTL (choline transporter-like) family.
   
  
 0.575
J056_000428
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.443
J056_004005
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
      
 0.420
J056_002179
Putative enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
    
 
 0.402
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.