STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_003689SANTA domain-containing protein. (1018 aa)    
Predicted Functional Partners:
J056_003132
Spindle pole body component.
    
 
 0.703
J056_004171
Serine/threonine-protein kinase.
   
 0.701
J056_001672
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome.
    
 0.692
J056_003585
Spindle pole body component.
    
 
 0.681
J056_000316
Cytoskeleton-associated protein 5.
   
 0.651
J056_000718
Myosin-2A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.642
J056_004346
Myosin-2A; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.642
J056_004506
Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures.
    
 0.625
J056_001584
Magnesium transport protein CorA.
   
 0.602
J056_004585
Integral membrane protein sed5; Belongs to the syntaxin family.
    
 0.557
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.