STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_001457Zinc finger protein C3H1.11. (268 aa)    
Predicted Functional Partners:
J056_002254
Mitogen-activated protein kinase.
   
 0.716
J056_001572
Regulatory protein abaA.
    
 
 0.685
J056_003616
Serine/threonine-protein kinase cek1.
    
 
 0.597
J056_002385
Lysine-specific demethylase 4B.
    
 0.456
J056_004012
Importin subunit beta-3.
   
   0.456
J056_001541
Protein kinase byr2.
    
 
 0.432
J056_001479
Transcription factor tau subunit sfc4.
    
 0.409
J056_002699
Dual specificity protein kinase FUZ7.
    
 0.405
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.