STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_001165Developmental regulator flbA. (655 aa)    
Predicted Functional Partners:
J056_001585
Guanine nucleotide-binding protein subunit beta.
   
 0.981
J056_003100
Protein kinase gsk3; Belongs to the protein kinase superfamily.
   
 0.981
J056_001352
Guanine nucleotide-binding protein alpha-1 subunit.
   
 0.938
J056_003762
Guanine nucleotide-binding protein alpha-3 subunit.
   
 0.938
J056_001214
Chitin synthase export chaperone.
   
 0.812
J056_000985
Chitin synthase export chaperone.
   
 0.812
J056_003821
Uracil phosphoribosyltransferase.
   
 0.805
J056_004462
Uridine-cytidine kinase-like 1.
   
 0.805
J056_000610
RING-type domain-containing protein.
   
 0.798
J056_001293
T-complex protein 1 subunit epsilon.
    
 0.787
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.