STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_001147Putative GTPase-activating protein. (1038 aa)    
Predicted Functional Partners:
J056_001312
ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
    
 0.647
J056_000392
ADP-ribosylation factor-like protein 5B; Belongs to the small GTPase superfamily. Arf family.
    
 0.647
J056_000469
Endocytosis protein end4.
   
 
  0.641
J056_001782
Putative inositol polyphosphate 5-phosphatase C9G1.10c.
   
 
  0.625
J056_002974
AP-2 complex subunit beta.
   
 
  0.611
J056_001973
AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
   
 
  0.611
J056_003038
GTPase-activating protein gyp7.
   
  
 0.554
J056_002758
GTPase-activating protein gyp1.
      
 0.539
J056_003242
Serine/threonine-protein kinase ppk30.
   
 
  0.494
J056_001121
Dynamin-like protein C12C2.08; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
   
 
  0.464
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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