STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_003266Release factor glutamine methyltransferase. (256 aa)    
Predicted Functional Partners:
J056_003263
Uncharacterized protein.
    
 0.933
J056_002283
RF_PROK_I domain-containing protein.
  
 
 0.832
J056_000344
RF_PROK_I domain-containing protein.
  
 
 0.832
J056_001253
Threonylcarbamoyl-AMP synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
 
  
 0.813
J056_000923
Eukaryotic peptide chain release factor subunit 1.
    
 0.754
J056_001340
Uncharacterized protein.
   
 
 0.689
J056_003267
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
     
 0.671
J056_000248
Eukaryotic peptide chain release factor GTP-binding subunit.
    
 0.625
J056_004616
ERF1 methyltransferase catalytic subunit mtq2.
      
 0.573
J056_001249
Arginine N-methyltransferase 2; S-adenosyl-L-methionine-dependent protein-arginine N- methyltransferase that methylates the delta-nitrogen atom of arginine residues to form N5-methylarginine (type IV) in target proteins. Monomethylates ribosomal protein L12.
    
 
 0.498
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.