STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_003360Ribose-phosphate pyrophosphokinase. (474 aa)    
Predicted Functional Partners:
J056_002133
Amidophosphoribosyltransferase.
  
 0.937
J056_001956
Putative phosphoglucomutase.
     
 0.909
J056_004265
Ribose-phosphate pyrophosphokinase 2.
  
  
 
0.905
J056_001886
ATP phosphoribosyltransferase.
  
 
 0.888
J056_002571
Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.887
J056_001659
Pyridoxine biosynthesis protein PDX1; Belongs to the PdxS/SNZ family.
   
 
  0.802
J056_002717
Glutamine amidotransferase subunit PdxT.
     
  0.800
J056_000977
Histidine biosynthesis trifunctional protein.
  
  
 0.728
J056_002926
Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities.
  
  
 0.712
J056_004389
Tryptophan synthase.
  
  
 0.707
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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