STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_000526GTPase-activating protein GYP5. (530 aa)    
Predicted Functional Partners:
J056_004116
Ras-related protein Rab-6A.
    
 0.722
J056_001227
GTP-binding protein ypt1.
    
 0.667
J056_002688
Reduced viability upon starvation protein.
    
 
 0.501
J056_002387
Chloride channel protein.
 
  
   0.477
J056_002758
GTPase-activating protein gyp1.
    
 
0.470
J056_003038
GTPase-activating protein gyp7.
      
 0.446
J056_004635
Protein hob3.
    
 
 0.440
J056_002946
ABC1 family protein C15C4.02.
 
      0.437
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.