STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_003367GDP-mannose transporter. (212 aa)    
Predicted Functional Partners:
J056_003634
26S proteasome non-ATPase regulatory subunit 14.
   
 
 0.623
J056_000181
UDP-galactose transporter.
   
  
 0.621
J056_000106
SWI/SNF and RSC complexes subunit ssr2.
      
 0.609
J056_002409
SNF1 protein kinase subunit beta-2.
      
 0.605
J056_002732
Mannose-6-phosphate isomerase.
   
  
 0.575
J056_004746
TPT domain-containing protein.
   
  
 0.571
J056_001477
UDP-galactose transporter-like protein 1.
   
  
 0.557
J056_002097
Putative ribosomal RNA methyltransferase nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
 
      0.521
J056_004086
Calnexin-like protein.
   
 
 0.520
J056_003664
Putative transporter C83.11.
      
 0.520
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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