STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_004187GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (217 aa)    
Predicted Functional Partners:
J056_002695
Exportin-1; Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family.
   
 0.999
J056_003797
Nucleoporin NSP1.
   
 0.999
J056_000125
Ran GTPase-activating protein 1.
   
 0.999
J056_000413
Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.
   
 0.997
J056_003591
Ran-specific GTPase-activating protein 1.
   
 0.996
J056_004307
Importin subunit beta-1.
   
 0.994
J056_002153
Nuclear transport factor 2.
   
 
 0.966
J056_002468
Protein pim1.
   
 0.964
J056_001146
Ran-specific GTPase-activating protein 2.
   
 0.962
J056_000995
X-linked retinitis pigmentosa GTPase regulator.
   
 0.956
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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