STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_003027Tr-type G domain-containing protein. (788 aa)    
Predicted Functional Partners:
J056_003599
Meiotically up-regulated 71 protein.
    
 0.968
J056_000796
60S ribosomal protein L5-A.
  
 0.834
J056_004143
40S ribosomal protein S22; Belongs to the universal ribosomal protein uS8 family.
  
 0.834
J056_003044
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 0.834
J056_002754
Uncharacterized protein.
   
 
 0.833
J056_000905
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
  
 0.833
J056_003074
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
  
 0.833
J056_000655
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 0.832
J056_002983
60S ribosomal protein L23a; Belongs to the universal ribosomal protein uL23 family.
  
 0.832
J056_000929
Uncharacterized protein.
  
 
 0.825
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.