STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_002934Putative long-chain-alcohol O-fatty-acyltransferase 10. (391 aa)    
Predicted Functional Partners:
J056_001509
Ras-related protein Rab-5A.
    
 0.481
J056_003049
Ras-related protein Rab-5C.
    
 0.481
J056_000201
Ras-related protein Rab-5B.
    
 0.481
J056_002234
Vacuolar protein sorting-associated protein 29.
    
 
 0.464
J056_002278
Ankyrin repeat protein nuc-2.
    
 0.411
J056_001613
Translation initiation factor eIF-2B subunit beta; Belongs to the eIF-2B alpha/beta/delta subunits family.
    
   0.408
J056_002343
UBA domain-containing protein 7.
   
 0.400
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.