STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_002061Uncharacterized protein; Belongs to the ketol-acid reductoisomerase family. (390 aa)    
Predicted Functional Partners:
J056_000137
Acetolactate synthase.
  
 
 0.982
J056_001986
ACT domain-containing protein.
   
 0.962
J056_001887
Dihydroxy-acid dehydratase.
   
 0.957
J056_000156
Dihydroxy-acid dehydratase.
   
 0.957
J056_004763
3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
 
 
  
 0.923
J056_004065
Enamine/imine deaminase.
      0.782
J056_002858
NEDD8-conjugating enzyme UBC12; Belongs to the ubiquitin-conjugating enzyme family.
 
      0.621
J056_002390
T-complex protein 1 subunit gamma.
      
 0.613
J056_000027
2-isopropylmalate synthase.
   
  
 0.534
J056_004389
Tryptophan synthase.
     
 0.527
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.