STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_002132Uncharacterized protein. (1392 aa)    
Predicted Functional Partners:
J056_002252
Intersectin-1.
    
  0.822
J056_003260
AP-2 complex subunit mu-A; Belongs to the adaptor complexes medium subunit family.
    
 0.684
J056_002918
Vacuolar protein-sorting protein BRO1.
    
 0.650
J056_001082
U3 small nucleolar RNA-associated protein 14.
   
 0.626
J056_003808
Putative U3 small nucleolar RNA-associated protein 18.
   
 0.610
J056_003646
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.594
J056_003691
CBF domain-containing protein.
   
  0.588
J056_002974
AP-2 complex subunit beta.
    
 0.583
J056_001973
AP complex subunit beta; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
    
 0.583
J056_000480
rRNA biosis protein rrp5.
  
 0.580
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.