STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_002156Calcium-transporting ATPase 3; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. (1054 aa)    
Predicted Functional Partners:
J056_002000
Calcium-transporting ATPase 2; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family.
  
 
0.625
J056_002110
Meiotically up-regulated 89 protein; Belongs to the CDC50/LEM3 family.
    
 0.528
J056_003832
ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
  
 0.459
J056_002045
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
    
0.400
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.