STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_002225Adenosylhomocysteinase. (432 aa)    
Predicted Functional Partners:
J056_001396
Putative 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase.
 
 
 0.995
J056_002535
Cystathionine beta-synthase.
  
 0.970
J056_004739
Putative cystathionine gamma-synthase.
  
 0.958
J056_001207
Cystathionine gamma-lyase.
  
 0.920
J056_001073
Cysteine synthase.
  
 0.911
J056_002922
Cysteine synthase 2.
  
 0.911
J056_000578
Threonine dehydratase.
  
 
 0.861
J056_003067
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP.
  
 
 0.858
J056_003690
Homoserine dehydrogenase.
   
 
 0.824
J056_004459
Homoserine kinase.
     
  0.800
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.