STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_002053Uncharacterized protein. (409 aa)    
Predicted Functional Partners:
J056_003665
DNA polymerase delta small subunit.
   
 0.838
J056_001049
DNA polymerase.
    
 0.835
J056_000833
DNA polymerase.
    
 0.694
J056_002368
Alpha-1,3/1,6-mannosyltransferase ALG2.
   
 0.636
J056_000994
Chitobiosyldiphosphodolichol beta-mannosyltransferase.
   
 0.636
J056_000901
GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase.
   
 0.636
J056_002266
Phosphatidylinositol N-acetylglucosaminyltransferase gpi3 subunit.
   
 0.636
J056_001322
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.634
J056_004032
N-acetylserotonin O-methyltransferase-like protein.
      
 0.599
J056_004190
Alpha-glucosidase; Belongs to the glycosyl hydrolase 31 family.
     
 0.579
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.