STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_002245Metal homeostasis factor atx1. (74 aa)    
Predicted Functional Partners:
J056_004093
Putative copper-transporting ATPase HMA5.
    
 0.928
J056_000919
Copper-transporting ATPase 1.
    
 0.928
J056_001210
NADH dehydrogenase 1 alpha subcomplex subunit 5.
   
 
 0.863
J056_002833
Sod_Cu domain-containing protein.
    
 0.744
J056_001712
Uncharacterized protein.
   
   0.692
J056_001258
RNA polymerase I-specific transcription initiation factor rrn3.
    
 
 0.689
J056_003592
Uncharacterized protein.
    
   0.679
J056_003354
Cytochrome c oxidase copper chaperone.
   
 
 0.657
J056_000371
Uncharacterized protein.
      
 0.616
J056_004734
Uncharacterized protein.
   
  
 0.591
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.