STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_002251Replication factor C subunit 4. (331 aa)    
Predicted Functional Partners:
J056_001669
Replication factor C subunit 1.
   
0.999
J056_001302
Cell cycle checkpoint protein RAD17.
    
 0.999
J056_004560
Replication factor C subunit 3.
  
0.999
J056_004226
Replication factor C subunit 5.
 
 
0.999
J056_003902
Replication factor C subunit 2.
  
0.999
J056_001322
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.998
J056_004567
Cell cycle checkpoint control protein RAD9B.
   
 0.982
J056_001739
N-acetyltransferase eso1.
   
 0.981
J056_003445
Chromosome transmission fidelity protein 18.
   
0.981
J056_000639
Telomere length regulation protein elg1.
   
 0.978
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.