STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_002178Chromatin structure-remodeling complex subunit snf21. (1470 aa)    
Predicted Functional Partners:
J056_001109
SWI/SNF chromatin-remodeling complex subunit snf5.
   
 0.957
J056_000390
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2.
   
 0.955
J056_000106
SWI/SNF and RSC complexes subunit ssr2.
   
 0.955
J056_003109
Actin-related protein 4; Belongs to the actin family.
    
 0.921
J056_000091
SWI/SNF chromatin-remodeling complex subunit snf5.
   
 0.813
J056_001599
Protein polybromo-1.
   
0.794
J056_001675
Chromatin structure-remodeling complex subunit rsc1.
   
 0.779
J056_004421
SWI/SNF chromatin-remodeling complex subunit sol1.
   
 
 0.767
J056_001069
Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme.
   
 0.709
J056_001320
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.
   
 0.690
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.