STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_000419Protein LAS1. (134 aa)    
Predicted Functional Partners:
J056_000150
Polynucleotide 5'-hydroxyl-kinase GRC3.
   
 0.999
J056_003930
Pre-rRNA-processing protein IPI3.
   
 0.880
J056_004219
Testis-expressed sequence 10 protein.
   
 0.843
J056_001241
Sentrin-specific protease 1.
   
 0.836
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.767
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
  0.752
J056_000695
Putative rRNA-processing protein ebp2.
   
 
  0.740
J056_003432
Guanine nucleotide-binding protein-like 3-like protein.
   
 
  0.692
J056_000016
Guanine nucleotide-binding protein-like 3-like protein.
   
 
  0.692
J056_003463
Ubiquitin-like-specific protease 2.
   
 0.690
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
Server load: low (30%) [HD]