STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_000030Phenylalanine--tRNA ligase beta subunit. (628 aa)    
Predicted Functional Partners:
J056_001168
Uncharacterized protein.
  
 0.999
J056_003635
Phenylalanine--tRNA ligase alpha subunit.
  
 0.999
J056_000818
Putative leucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.969
J056_000940
Elongation factor 1-beta; Belongs to the EF-1-beta/EF-1-delta family.
 
 
    0.933
J056_000655
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.820
J056_003912
GMP synthase.
  
  
 0.813
J056_001152
Isoleucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.798
J056_004252
Valine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.797
J056_001661
Isoleucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.787
J056_000569
Lysine--tRNA ligase.
  
  
 0.787
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.