STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_000337Ras-related GTP-binding protein A. (364 aa)    
Predicted Functional Partners:
J056_000332
Ras-related GTP-binding protein D.
    
 0.999
J056_000835
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.992
J056_004577
WD repeat-containing protein mip1.
    
 0.988
J056_001665
Exosome complex exonuclease rrp6.
    
 0.923
J056_000521
WD repeat-containing protein wat1.
    
 0.896
J056_002746
Tuberous sclerosis 2 protein-like protein.
    
 0.871
J056_003628
GTP-binding protein rhb1.
    
 0.864
J056_004527
Vacuolar amino acid transporter 5.
   
 0.819
J056_001347
Nucleoporin SEH1; Belongs to the WD repeat SEC13 family.
   
 
 0.811
J056_001188
Protein transport protein SEC13; Belongs to the WD repeat SEC13 family.
    
 0.801
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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