STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_002915Uncharacterized protein. (395 aa)    
Predicted Functional Partners:
J056_001481
Protein RIC1-like protein.
    
 0.680
J056_004573
ADP-ribosylation factor-like protein 1.
    
 0.678
J056_004488
Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.
    
  0.675
J056_004116
Ras-related protein Rab-6A.
    
 0.667
J056_003265
Retrograde golgi family transport protein RGP1-like protein.
    
  0.617
J056_001782
Putative inositol polyphosphate 5-phosphatase C9G1.10c.
     
 0.611
J056_002139
Vacuolar protein sorting-associated protein 54.
     
 0.600
J056_003102
Vesicular-fusion protein sec18.
    
  0.595
J056_000608
Conserved oligomeric golgi family complex subunit 1.
   
 
  0.593
J056_000659
Vesicular-fusion protein SEC17.
    
  0.586
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.