STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_002950Sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating. (416 aa)    
Predicted Functional Partners:
J056_002041
Methylsterol monooxygenase; Belongs to the sterol desaturase family.
   
 0.998
J056_001663
Squalene synthase.
  
 
 0.989
J056_001735
Lanosterol 14-alpha demethylase; Belongs to the cytochrome P450 family.
 
 
 0.987
J056_000439
Squalene monooxygenase.
   
 
 0.986
J056_000377
Delta(14)-sterol reductase.
   
 
 0.984
J056_002076
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.983
J056_000405
Ergosterol biosynthetic protein 28.
   
 
 0.980
J056_002357
Sterol 24-C-methyltransferase erg6; Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6/SMT family.
    
 0.979
J056_001933
Delta(24(24(1)))-sterol reductase.
   
 
 0.979
J056_003563
C-5 sterol desaturase; Belongs to the sterol desaturase family.
   
 0.979
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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