STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_002109YTH domain family protein 2. (436 aa)    
Predicted Functional Partners:
J056_001511
N6-adenosine-methyltransferase 70 kDa subunit; Belongs to the MT-A70-like family.
  
   
 0.717
J056_002978
Methyltransferase-like protein 14; Belongs to the MT-A70-like family.
  
   
 0.716
J056_002824
YTH domain-containing protein 2.
  
 
0.682
J056_001967
CCR4-NOT transcription complex subunit 7.
   
 
 0.612
J056_002675
Meiosis protein mei2.
    
 
 0.467
J056_000565
CCR4-NOT transcription complex subunit 1.
   
 
 0.445
J056_004065
Enamine/imine deaminase.
    
 
 0.432
J056_001868
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
   
 
 0.431
J056_003791
ATP-dependent RNA helicase mtr4.
    
 
 0.419
J056_002427
General negative regulator of transcription subunit 4.
   
 
 0.407
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
Server load: low (22%) [HD]