STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_002294Uncharacterized protein. (539 aa)    
Predicted Functional Partners:
J056_000888
FAM203 family protein.
   
   0.637
J056_004552
RNA polymerase II-associated protein 1-like protein.
   
 0.621
J056_004626
Cell division control protein 73.
    
 0.610
J056_003973
Uncharacterized protein.
   
 0.610
J056_003098
Anaphase-promoting complex subunit cut9.
    
 0.607
J056_002296
Anaphase-promoting complex subunit 10.
    
 0.604
J056_001717
RNA polymerase-associated protein LEO1.
    
 0.600
J056_003288
Negative regulator of mitosi.
    
 0.599
J056_004234
Anaphase-promoting complex subunit 2; Belongs to the cullin family.
    
 0.572
J056_000138
FACT complex subunit SPT16.
    
 0.541
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.