STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_002319Protein transport protein sec71. (1766 aa)    
Predicted Functional Partners:
J056_001646
SEC7 domain-containing protein.
   
 
0.947
J056_004573
ADP-ribosylation factor-like protein 1.
    
 0.888
J056_001312
ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family.
    
 0.682
J056_001159
ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family.
   
 0.644
J056_000392
ADP-ribosylation factor-like protein 5B; Belongs to the small GTPase superfamily. Arf family.
    
 0.606
J056_000244
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
   0.539
J056_000479
Uncharacterized protein.
 
      0.457
J056_000907
ADP-ribosylation factor GTPase-activating protein glo3.
      
 0.448
J056_001227
GTP-binding protein ypt1.
    
 
 0.428
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.