STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
J056_000095Chromatin modification-related protein. (339 aa)    
Predicted Functional Partners:
J056_002986
Enhancer of polycomb-like protein.
   
 0.976
J056_001003
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.959
J056_001709
Transcription-associated protein 1; Belongs to the PI3/PI4-kinase family.
   
 0.940
J056_004395
SWR1-complex protein 4.
   
 0.932
J056_000786
Chromatin modification-related protein EAF1.
    
 0.922
J056_003109
Actin-related protein 4; Belongs to the actin family.
   
 0.913
J056_001829
Protein AF-9-like protein.
   
 0.854
J056_001652
Chromatin modification-related protein EAF3.
   
 0.832
J056_001817
Peregrin.
    
 0.759
J056_000231
Paired amphipathic helix protein pst1.
   
 
 0.751
Your Current Organism:
Wallemia ichthyophaga
NCBI taxonomy Id: 1299270
Other names: W. ichthyophaga EXF-994, Wallemia ichthyophaga EXF-994
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.