STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001890765_00612Unannotated protein. (154 aa)    
Predicted Functional Partners:
GCA_001890765_00930
Unannotated protein.
   
 
 0.939
GCA_001890765_00611
Unannotated protein.
 
    
0.798
GCA_001890765_01507
Unannotated protein.
  
     0.764
GCA_001890765_02962
Unannotated protein.
   
 0.752
GCA_001890765_02975
Unannotated protein.
   
 0.752
GCA_001890765_03485
Unannotated protein.
   
 0.752
GCA_001890765_04035
Unannotated protein.
  
    0.643
GCA_001890765_02087
Unannotated protein.
  
 
 0.640
GCA_001890765_03971
Unannotated protein.
  
     0.638
GCA_001890765_02867
Unannotated protein.
  
     0.634
Your Current Organism:
Spirulina major
NCBI taxonomy Id: 129961
Other names: S. major PCC 6313, Spirulina major PCC 6313, Spirulina sp. PCC 6313
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.