STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900166585_00532Unannotated protein. (450 aa)    
Predicted Functional Partners:
GCA_900166585_00534
Unannotated protein.
 
 
 0.998
GCA_900166585_00529
Unannotated protein.
 
 
0.990
GCA_900166585_00531
Unannotated protein.
 
  
 0.990
GCA_900166585_02515
Unannotated protein.
 
 
0.983
GCA_900166585_03496
Unannotated protein.
 
 
0.972
GCA_900166585_02364
Unannotated protein.
 
  
 0.963
GCA_900166585_00350
Unannotated protein.
 
 
0.957
GCA_900166585_03495
Unannotated protein.
 
 
 0.953
GCA_900166585_00535
Unannotated protein.
  
 0.937
GCA_900166585_00536
Unannotated protein.
 
  
 0.921
Your Current Organism:
Bacillus jeotgali
NCBI taxonomy Id: 129985
Other names: B. jeotgali, Bacillus jeotgali Yoon et al. 2001, Bacillus sp. YKJ-10, Bacillus sp. YKJ-11, CIP 107104, DSM 18226, JCM 10885, KCCM 41040, strain YKJ-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.