STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900166585_01447Unannotated protein. (334 aa)    
Predicted Functional Partners:
GCA_900166585_03431
Unannotated protein.
    
 
 0.890
GCA_900166585_04608
Unannotated protein.
    
 0.803
GCA_900166585_00422
Unannotated protein.
   
 
 0.787
GCA_900166585_00363
Unannotated protein.
     
 0.690
GCA_900166585_02854
Unannotated protein.
     
 0.690
GCA_900166585_03040
Unannotated protein.
     
 0.690
GCA_900166585_04118
Unannotated protein.
     
 0.690
GCA_900166585_03361
Unannotated protein.
 
 
 0.634
GCA_900166585_01446
Unannotated protein.
  
 
 0.615
GCA_900166585_02439
Unannotated protein.
    
 
 0.589
Your Current Organism:
Bacillus jeotgali
NCBI taxonomy Id: 129985
Other names: B. jeotgali, Bacillus jeotgali Yoon et al. 2001, Bacillus sp. YKJ-10, Bacillus sp. YKJ-11, CIP 107104, DSM 18226, JCM 10885, KCCM 41040, strain YKJ-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.