STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I595_1398TonB-dependent receptor. (806 aa)    
Predicted Functional Partners:
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
       0.786
I595_1567
Glycosyl hydrolase BNR repeat-containing protein.
  
     0.649
I595_335
Glycosyl hydrolase, BNR repeat-containing protein.
  
     0.646
I595_1565
Glycosyl hydrolase BNR repeat-containing protein.
  
     0.638
I595_1890
Glycosyl hydrolase BNR repeat-containing protein.
  
     0.634
I595_3025
Putative glycosyl hydrolase, BNR repeat.
  
     0.603
I595_3021
Glycosyl hydrolase BNR repeat-containing protein.
  
     0.581
I595_1396
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
       0.542
I595_2541
Ferric siderophore transport system, periplasmic binding protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
   0.519
I595_36
Hypothetical protein.
  
     0.518
Your Current Organism:
Croceitalea dokdonensis
NCBI taxonomy Id: 1300341
Other names: C. dokdonensis DOKDO 023, Croceitalea dokdonensis DOKDO 023
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.