STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I595_1872Hypothetical protein. (236 aa)    
Predicted Functional Partners:
I595_672
LmbE family protein.
  
     0.731
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.681
I595_674
Sodium iodide symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.668
bshC
Hypothetical protein; Belongs to the BshC family.
  
     0.618
I595_2886
Two-component system hybrid-Sensor histidine kinase.
    
 0.608
I595_2982
Peptidase M23.
   
   0.594
I595_1871
Hypothetical protein.
       0.564
I595_3045
Hypothetical protein.
  
     0.547
I595_3536
Putative ABC importer, ATPase component.
  
     0.512
I595_3534
Group 1 glycosyl transferase.
  
     0.502
Your Current Organism:
Croceitalea dokdonensis
NCBI taxonomy Id: 1300341
Other names: C. dokdonensis DOKDO 023, Croceitalea dokdonensis DOKDO 023
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.