STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I595_1908Aspartate kinase 2. (219 aa)    
Predicted Functional Partners:
I595_1901
Glycoside hydrolase family protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
  0.718
I595_1240
Hypothetical protein.
  
     0.669
I595_3583
Hypothetical protein.
  
     0.647
I595_291
Hypothetical protein.
  
 
   0.639
I595_2980
Hypothetical protein.
  
 
   0.624
I595_1909
Hypothetical protein.
       0.613
I595_1907
Hypothetical protein; Belongs to the UPF0102 family.
       0.608
I595_157
Hypothetical protein.
  
     0.581
I595_1090
Hypothetical protein.
  
     0.574
I595_1026
Hypothetical protein.
  
 
   0.552
Your Current Organism:
Croceitalea dokdonensis
NCBI taxonomy Id: 1300341
Other names: C. dokdonensis DOKDO 023, Croceitalea dokdonensis DOKDO 023
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.