STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I595_2174Hypothetical protein. (211 aa)    
Predicted Functional Partners:
I595_2173
Signal peptidase I; Belongs to the peptidase S26 family.
 
     0.849
I595_2171
Hypothetical protein.
 
     0.830
I595_2175
Hypothetical protein.
       0.814
I595_2169
Cobyrinic acid ac-diamide synthase.
       0.705
I595_2172
Dihydrodipicolinate reductase; Belongs to the DapB family.
       0.705
I595_2170
Chromosome (plasmid) partitioning protein ParB; Belongs to the ParB family.
       0.671
I595_1058
Hypothetical protein.
  
     0.670
I595_1224
Uroporphyrinogen III synthase HEM4.
  
     0.665
I595_2182
Hypothetical protein.
  
     0.613
I595_2371
Hypothetical protein.
  
     0.593
Your Current Organism:
Croceitalea dokdonensis
NCBI taxonomy Id: 1300341
Other names: C. dokdonensis DOKDO 023, Croceitalea dokdonensis DOKDO 023
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.