STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I595_2450Two component transcriptional regulator, LytTR family. (242 aa)    
Predicted Functional Partners:
I595_2449
Hypothetical protein.
 
     0.893
I595_3643
Signal transduction histidine kinase, LytS.
  
  0.842
I595_2446
PAS/PAC sensor signal transduction histidine kinase.
 
     0.822
I595_2650
Putative signal transduction histidine kinase.
  
  0.820
I595_2448
Histidine kinase.
 
     0.816
I595_2764
Signal transduction histidine kinase.
  
  0.816
I595_1575
Putative signal transduction histidine kinase.
 
 0.815
I595_731
Putative two-component system sensor protein, no kinase domain.
 
 0.815
I595_2445
Heme NO-binding domain-containing protein.
 
     0.813
I595_921
Signal transduction histidine kinase, LytS.
  
  0.813
Your Current Organism:
Croceitalea dokdonensis
NCBI taxonomy Id: 1300341
Other names: C. dokdonensis DOKDO 023, Croceitalea dokdonensis DOKDO 023
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.