STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
I595_2483Hypothetical protein. (68 aa)    
Predicted Functional Partners:
I595_2484
N-acetyltransferase GCN5.
 
  
 0.937
I595_2482
Hypothetical protein.
  
  
 0.861
I595_2486
Acetyltransferase.
 
  
 0.819
I595_2485
Pirin domain protein; Belongs to the pirin family.
       0.712
I595_1892
Acetyltransferase.
  
  
 0.659
I595_717
GNAT family acetyltransferase.
  
  
 0.659
I595_89
Hypothetical protein.
  
  
 0.659
I595_1738
General stress protein.
   
    0.573
I595_2489
DoxX family protein.
 
    0.471
I595_2487
Putative membrane protein.
  
    0.431
Your Current Organism:
Croceitalea dokdonensis
NCBI taxonomy Id: 1300341
Other names: C. dokdonensis DOKDO 023, Croceitalea dokdonensis DOKDO 023
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.